AChemKit.tools.chem_to_pdf — AChemKit v0.1 documentation

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# AChemKit.tools.chem_to_pdf

Produces a .pdf output from a provided .chem format input

The output files in .pdf format produced using Graphviz tools. In particular, they are constructed using `AChemKit.utils.simpledot.SimpleDot`.

For information in .chem files see .chem Format.

Usage: chem_to_pdf.py [options]

Options:

> `-h, --help` | show a help message and exit
> `-i INFILE, --infile=INFILE`
> | read from INFILE (if ommited, use stdin)
> `-o OUTFILE, --outfile=OUTFILE`
> | write to OUTFILE in .pdf format (if ommited, use stdout)
> `-l LAYOUT, --layout=LAYOUT`
> | Graphviz layout to use (if ommited, use dot)

Classes

`ReactionNetwork`(rates) | A dictionary of reactions where each key is a reaction composed of (reactants, products) and each value is the rate.

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